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Recently, in situ YSI EXO2 phycocyanin fluorescence probes have been widely deployed as a means to determine cyanobacterial abundance in drinking water sources, yet few studies have evaluated the effects of natural organic matter (NOM) and the ambient water temperature on the probe readings. In this study, Suwannee River NOM was added to laboratory cultivated cyanobacterial species to test the performance of the phycocyanin probe. The impact of temperature on phycocyanin fluorescence was evaluated by monitoring the laboratory cultivated cyanobacterial species and extracted phycocyanin pigment. Additionally, in situ phycocyanin fluorescence of the field samples from the water intake of a drinking water treatment plant (DWTP) in 2018 were compared with grab sample laboratory taxonomic analyses. We found: (1) the presence of Suwannee River NOM leads to the decrease in cell-bound cyanobacterial phycocyanin readings; (2) increasing ambient water temperature reduces dissolved and cell-bound cyanobacterial phycocyanin readings; (3) field study phycocyanin probe readings significantly correlated with the total cyanobacterial biovolume (R = 0.73, p < 0.1), and the relationship depends on the biovolume of dominant cyanobacterial species; (4) phycocyanin probe readings have a strong positive correlation with the natural light intensities; and (5) probe users should be fully aware of the sources of interferences when interpreting the results and apply the other physical-chemical parameters data simultaneously generated by the fluorometry to improve the probe’s measurements.

Health-related concerns about cyanobacteria-laden sludge of drinking water treatment plants (DWTPs) have been raised in the past few years. Microscopic taxonomy, shotgun metagenomic sequencing, and microcystin (MC) measurement were applied to study the fate of cyanobacteria and cyanotoxins after controlled sludge storage (stagnation) in the dark in a full-scale drinking water treatment plant within 7 to 38 days. For four out of eight dates, cyanobacterial cell growth was observed by total taxonomic cell counts during sludge stagnation. The highest observed cell growth was 96% after 16 days of stagnation. Cell growth was dominated by potential MC producers such as Microcystis, Aphanocapsa, Chroococcus, and Dolichospermum. Shotgun metagenomic sequencing unveiled that stagnation stress shifts the cyanobacterial communities from the stress-sensitive Nostocales (e.g., Dolichospermum) order towards less compromised orders and potential MC producers such as Chroococcales (e.g., Microcystis) and Synechococcales (e.g., Synechococcus). The relative increase of cyanotoxin producers presents a health challenge when the supernatant of the stored sludge is recycled to the head of the DWTP or discharged into the source. These findings emphasize the importance of a strategy to manage cyanobacteria-laden sludge and suggest practical approaches should be adopted to control health/environmental impacts of cyanobacteria and cyanotoxins in sludge.

The excessive proliferation of cyanobacteria in surface waters is a widespread problem worldwide, leading to the contamination of drinking water sources. Short- and long-term solutions for managing cyanobacterial blooms are needed for drinking water supplies. The goal of this research was to investigate the cyanobacteria community composition using shotgun metagenomics in a short term, in situ mesocosm experiment of two lakes following their coagulation with ferric sulfate (Fe2(SO4)3) as an option for source water treatment. Among the nutrient paramenters, dissolved nitrogen was related to Microcystis in both Missisquoi Bay and Petit Lac St. François, while the presence of Synechococcus was related to total nitrogen, dissolved nitrogen, dissolved organic carbon, and dissolved phosphorus. Results from the shotgun metagenomic sequencing showed that Dolichospermum and Microcystis were the dominant genera in all of the mesocosms in the beginning of the sampling period in Missisquoi Bay and Petit Lac St. François, respectively. Potentially toxigenic genera such as Microcystis were correlated with intracellular microcystin concentrations. A principal component analysis showed that there was a change of the cyanobacterial composition at the genus level in the mesocosms after two days, which varied across the studied sites and sampling time. The cyanobacterial community richness and diversity did not change significantly after its coagulation by Fe2(SO4)3 in all of the mesocosms at either site. The use of Fe2(SO4)3 for an onsite source water treatment should consider its impact on cyanobacterial community structure and the reduction of toxin concentrations.

Freshwater bodies and, consequently, drinking water treatment plants (DWTPs) sources are increasingly facing toxic cyanobacterial blooms. Even though conventional treatment processes including coagulation, flocculation, sedimentation, and filtration can control cyanobacteria and cell-bound cyanotoxins, these processes may encounter challenges such as inefficient removal of dissolved metabolites and cyanobacterial cell breakthrough. Furthermore, conventional treatment processes may lead to the accumulation of cyanobacteria cells and cyanotoxins in sludge. Pre-oxidation can enhance coagulation efficiency as it provides the first barrier against cyanobacteria and cyanotoxins and it decreases cell accumulation in DWTP sludge. This critical review aims to: (i) evaluate the state of the science of cyanobacteria and cyanotoxin management throughout DWTPs, as well as their associated sludge, and (ii) develop a decision framework to manage cyanobacteria and cyanotoxins in DWTPs and sludge. The review identified that lab-cultured-based pre-oxidation studies may not represent the real bloom pre-oxidation efficacy. Moreover, the application of a common exposure unit CT (residual concentration × contact time) provides a proper understanding of cyanobacteria pre-oxidation efficiency. Recently, reported challenges on cyanobacterial survival and growth in sludge alongside the cell lysis and cyanotoxin release raised health and technical concerns with regards to sludge storage and sludge supernatant recycling to the head of DWTPs. According to the review, oxidation has not been identified as a feasible option to handle cyanobacterial-laden sludge due to low cell and cyanotoxin removal efficacy. Based on the reviewed literature, a decision framework is proposed to manage cyanobacteria and cyanotoxins and their associated sludge in DWTPs.

The impact of oxidation on mitigation of cyanobacteria and cyanotoxins in drinking water treatment sludge was investigated at the laboratory and treatment plant scales. Two common oxidants, KMnO4 (5 and 10 mg/L) and H2O2 (10 and 20 mg/L) were applied under controlled steady-state conditions. Non-oxidized and oxidized sludge was left to stagnate in the dark for 7 to 38 days. Controlled laboratory trials show that KMnO4 and H2O2 decreased cell counts up to 62% and 77%, respectively. The maximum total MC level reduction achieved after oxidation was 41% and 98% using 20 mg/L H2O2 and 10 mg/L KMnO4, respectively. Stagnation caused cell growth up to 2.6-fold in 8 out of 22 oxidized samples. Microcystin (MC) producer orders as Chroococcales and Synechococcales were persistent while Nostocales was sensitive to combined oxidation and stagnation stresses. In parallel, two on-site shock oxidation treatments were performed in the DWTP’s sludge holding tank using 10 mg/L KMnO4. On-site shock oxidation decreased taxonomic cell counts by up to 43% within 24 h. Stagnation preceded by on-site shock oxidation could increase total cell counts by up to 55% as compared to oxidation alone. The increase of cell counts and mcyD gene copy numbers during stagnation revealed the impact of oxidation/stagnation on cyanobacterial cell growth. These findings show the limitations of sludge oxidation as a strategy to manage cyanobacteria and cyanotoxins in sludge and suggest that alternative approaches to prevent the accumulation and mitigation of cyanobacteria in sludge should be considered.

Conventional processes (coagulation, flocculation, sedimentation, and filtration) are widely used in drinking water treatment plants and are considered a good treatment strategy to eliminate cyanobacterial cells and cell-bound cyanotoxins. The diversity of cyanobacteria was investigated using taxonomic cell counts and shotgun metagenomics over two seasons in a drinking water treatment plant before, during, and after the bloom. Changes in the community structure over time at the phylum, genus, and species levels were monitored in samples retrieved from raw water (RW), sludge in the holding tank (ST), and sludge supernatant (SST). Aphanothece clathrata brevis, Microcystis aeruginosa, Dolichospermum spiroides, and Chroococcus minimus were predominant species detected in RW by taxonomic cell counts. Shotgun metagenomics revealed that Proteobacteria was the predominant phylum in RW before and after the cyanobacterial bloom. Taxonomic cell counts and shotgun metagenomic showed that the Dolichospermum bloom occurred inside the plant. Cyanobacteria and Bacteroidetes were the major bacterial phyla during the bloom. Shotgun metagenomics also showed that Synechococcus, Microcystis, and Dolichospermum were the predominant detected cyanobacterial genera in the samples. Conventional treatment removed more than 92% of cyanobacterial cells but led to cell accumulation in the sludge up to 31 times more than in the RW influx. Coagulation/sedimentation selectively removed more than 96% of Microcystis and Dolichospermum. Cyanobacterial community in the sludge varied from raw water to sludge during sludge storage (1–13 days). This variation was due to the selective removal of coagulation/sedimentation as well as the accumulation of captured cells over the period of storage time. However, the prediction of the cyanobacterial community composition in the SST remained a challenge. Among nutrient parameters, orthophosphate availability was related to community profile in RW samples, whereas communities in ST were influenced by total nitrogen, Kjeldahl nitrogen (N- Kjeldahl), total and particulate phosphorous, and total organic carbon (TOC). No trend was observed on the impact of nutrients on SST communities. This study profiled new health-related, environmental, and technical challenges for the production of drinking water due to the complex fate of cyanobacteria in cyanobacteria-laden sludge and supernatant.

Waterborne pathogens are heterogeneously distributed across various spatiotemporal scales in water resources, and representative sampling is therefore crucial for accurate risk assessment. Since regulatory monitoring of microbiological water quality is usually conducted at fixed time intervals, it can miss short-term fecal contamination episodes and underestimate underlying microbial risks. In the present paper, we developed a new automated sampling methodology based on near real-time measurement of a biochemical indicator of fecal pollution. Online monitoring of β-D-glucuronidase (GLUC) activity was used to trigger an automated sampler during fecal contamination events in a drinking water supply and at an urban beach. Significant increases in protozoan parasites, microbial source tracking markers and E. coli were measured during short-term (<24 h) fecal pollution episodes, emphasizing the intermittent nature of their occurrence in water. Synchronous triggering of the automated sampler with online GLUC activity measurements further revealed a tight association between the biochemical indicator and culturable E. coli. The proposed event sampling methodology is versatile and in addition to the two triggering modes validated here, others can be designed based on specific needs and local settings. In support to regulatory monitoring schemes, it should ultimately help gathering crucial data on waterborne pathogens more efficiently during episodic fecal pollution events.

Résumé: De nombreux articles publiés récemment ont laissé apparaître l’émergence d’un nouveau phénomène dans notre rapport avec la pandémie de COVID-19 : la fatigue pandémique. Ce phénomène suggère l’apparition d’une tendance générale de lassitude face aux mesures sanitaires et à l’état d’urgence devenu permanent. L’objectif de cet article est de replacer cet enjeu dans le contexte de la réalisation d’un projet de recherche portant sur les impacts psychosociaux durant la pandémie. Si relativement peu de recherches se sont intéressées à la fatigue pandémique, la réalité de ce phénomène a été mise en évidence dans le cadre d’un projet de recherche multi-annuelle effectuée durant la pandémie. En termes de méthode, notre équipe multidisciplinaire à l’Université de Sherbrooke a développé un protocole d’enquête permettant d’évaluer les effets de la pandémie de COVID-19 sur la santé mentale à travers des études transversales répétées. La dernière phase de l’enquête inclut un volet additionnel qui cherche à comprendre de quelle manière les conséquences de la pandémie peuvent s’appliquer à d’autres crises systémiques, notamment aux changements climatiques. Différentes vagues d'enquêtes nationales et internationales ont ainsi été réalisées (8 pays, taille minimale de l’échantillon 1000–1500 et échantillonnage par quota mis en oeuvre adapté à chaque pays et basé sur les données démographiques disponibles), et suivant l’évolution de la pandémie, nous avons introduit la notion de fatigue pandémique, ainsi que de fatigue climatique, afin de pouvoir mesurer l’impact de l’exposition prolongée à ces crises mondiales. Ces nouvelles données confirment nos résultats originaux : l’impact psychosocial de la pandémie est immense, en particulier en termes de fatigue pandémique, phénomène qui se retrouve à la fois au niveau comportemental et informationnel. Cette fatigue est un indicateur important à considérer afin d’améliorer notre capacité de réaction et d’adaptation à cette crise, mais également à celles futures.

The temperate mixedwood forests of eastern North America have been managed by partial cutting for several decades. To ensure that regeneration contributes to replacing the commercial-size stems that are removed by partial cutting, forest managers need to anticipate how saplings (i.e., regenerating trees with a diameter at breast height >1.0 cm) develop in terms of number and diameter. Using up to 20 years of monitoring data from three study sites, we developed a transition matrix model to predict the future number of saplings and their diameter distribution for mixed yellow birch ( Betula alleghaniensis Britton) – conifer stands. Our results show that partial cutting allowed yellow birch, red maple ( Acer rubrum L.), red spruce ( Picea rubens Sarg.), and balsam fir ( Abies balsamea (L.) Mill.) saplings to reach merchantable size faster and in greater numbers than in untreated control plots. We also found that fewer hardwood saplings (yellow birch and red maple) than softwood saplings (red spruce and balsam fir) were required to produce 1 m 2 ·ha −1 of merchantable basal area after 20–40 years. Finally, our model provides a tool for forest managers to predict sapling development in mixed hardwood and softwood stands over a full cutting cycle.

Abstract In northern hardwood forests, tree markers select the trees to be harvested during logging operations using classification systems that assign harvest priorities based on the presence of a wide range of individual defects. According to the most recent advances in our understanding of the impact of defects on both tree vigour (the risk of mortality or decline in growth) and quality (the potential for recovering valuable sawlogs), tree markers should adopt a simpler classification system that considers fewer defects than the current operational practice, and they should prioritize the removal of trees with crown dieback. Since the probability of developing defects and dying increases substantially with tree diameter, tree markers should also favour the removal of larger trees that have maintained their quality. However, these recommendations were developed based on tree-level analyses. To provide further validation at the stand scale, we compared stand improvement and value recovery under three tree marking regimes: a new, simplified regime based on the recommendations above, and two regimes used in the province of Quebec, Canada. To do so, we conducted tree marking simulations and value recovery assessments in 14 managed stands distributed across the northern hardwood range of Quebec. Our results confirmed that the simplified tree marking regime not only facilitated stand improvement by removing a greater proportion of low-vigour trees, but also recovered significantly more value (17% on average) at the stand scale. By prioritizing the removal of trees with crown dieback, the simplified regime was superior at salvaging the current value of low-vigour trees before they die or decline in quality. Based on our results, we propose simplified and empirically-validated tree marking guidelines for northern hardwood forests.

Northern hardwoods are susceptible to a wide range of defects that can reduce the amount of sound wood with desirable qualities, such as the clear sapwood of sugar maple trees. Yet, the rate at which trees decline in quality due to the development of such defects has never been quantified in northern hardwood forests due to a dearth of repeat inventories that record the appearance of defects over time. As a result, it remains uncertain whether, and how, selection management reduces the probability of decline in quality. In this study, we quantify the rate at which trees decline in quality due to the development of defects, and we test several hypotheses regarding the influence of selection management on quality. Our results show that (1) the probability of decline in quality increases as trees grow larger; (2) crown dieback also increases the probability of decline in quality; (3) the probability of decline in quality is slightly lower in managed stands than in unmanaged stands, and (4) the probability of decline in quality increases with the mean annual temperature of the site. Finally, we combined our estimates of the probability of decline in quality with previous estimates of the probability of mortality to assess the overall risk associated with retaining trees of different species, sizes, and vigour profiles. The resulting metric can inform efforts to improve the management of northern hardwood forests by providing an integrated estimate of the risk that the value of a tree will be reduced, or eliminated, due to mortality or decline in quality.

Performing a complete silvicultural diagnosis before a silvicultural treatment generally requires assessing the state of regeneration with the help of an inventory by sampling, particularly for stands dominated by sugar maple (Acer saccharum Marsh.) or yellow birch (Betula alleghaniensis Britt.), in which partial cuts are recommended. This inventory may then be compared to the standard or used in a growth model for saplings (trees for which the diameter measured at 1.3 m above the ground (DBH) varies from 1.1 cm to 9.0 cm). Some of these tools are based on sapling density, while others are based on the stocking of the saplings or on the stocking of total regeneration (combining saplings and seedlings with a DBH ≤ 1.0 cm). We assessed the number of plots required to estimate the density and the stocking of saplings with a given margin of error in 28 stands. The results show that more plots are required than usual in practice to inventory sapling density. The stocking is much easier to estimate precisely.

Multi-cohort forest management in northern hardwood stands may well be the best way to successfully regenerate tree species of intermediate shade tolerance, such as yellow birch (Betula alleghaniensis Britt.). The creation of large enough gaps in the canopy favors increased light availability within the opening, while soil scarification provides suitable germination seedbeds. Evidence of these methods’ success nonetheless remains mostly the purview of experimental studies rather than operational tests. In Quebec, Canada, the multi-cohort methods promoted include group selection cutting and patch cutting. The present study tested their implementation at an operational scale and over a large territory in both hardwood-dominated and mixedwood stands. We assessed their efficacy in promoting natural regeneration of commercial hardwood trees, notably yellow birch and sugar maple (Acer saccharum Marsh.). We conducted regeneration surveys at 2, 5, 10, and 15 years after harvest. Overall, group selection and patch cuttings were successful in regenerating the target species. Yellow birch, for instance, showed a mean stocking around 60% and a mean sapling density around 3400 stems ha−1 after 15 years. We compared several variables for measuring regeneration in early years, and found that the relative abundance, the stocking based on one stem per sampling unit, and the mean maximum height were good predictors of the relative presence of yellow birch and sugar maple in 15-year-old canopy openings. Using smaller sampling units (6.25 m2 rather than 25 m2) and waiting until year 5 may be more useful for making such predictions. In addition, there was an important turnover in vertical dominance in these openings. Non-commercial woody competitors were frequently dominant in early years but were often replaced by commercial hardwoods, notably yellow birch. We propose certain thresholds for assessing the success of post-harvest regeneration and for evaluating the need for a cleaning treatment.