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Waterborne pathogens are heterogeneously distributed across various spatiotemporal scales in water resources, and representative sampling is therefore crucial for accurate risk assessment. Since regulatory monitoring of microbiological water quality is usually conducted at fixed time intervals, it can miss short-term fecal contamination episodes and underestimate underlying microbial risks. In the present paper, we developed a new automated sampling methodology based on near real-time measurement of a biochemical indicator of fecal pollution. Online monitoring of β-D-glucuronidase (GLUC) activity was used to trigger an automated sampler during fecal contamination events in a drinking water supply and at an urban beach. Significant increases in protozoan parasites, microbial source tracking markers and E. coli were measured during short-term (<24 h) fecal pollution episodes, emphasizing the intermittent nature of their occurrence in water. Synchronous triggering of the automated sampler with online GLUC activity measurements further revealed a tight association between the biochemical indicator and culturable E. coli. The proposed event sampling methodology is versatile and in addition to the two triggering modes validated here, others can be designed based on specific needs and local settings. In support to regulatory monitoring schemes, it should ultimately help gathering crucial data on waterborne pathogens more efficiently during episodic fecal pollution events.
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Abstract Temporal variations in concentrations of pathogenic microorganisms in surface waters are well known to be influenced by hydrometeorological events. Reasonable methods for accounting for microbial peaks in the quantification of drinking water treatment requirements need to be addressed. Here, we applied a novel method for data collection and model validation to explicitly account for weather events (rainfall, snowmelt) when concentrations of pathogens are estimated in source water. Online in situ β ‐ d ‐glucuronidase activity measurements were used to trigger sequential grab sampling of source water to quantify Cryptosporidium and Giardia concentrations during rainfall and snowmelt events at an urban and an agricultural drinking water treatment plant in Quebec, Canada. We then evaluate if mixed Poisson distributions fitted to monthly sampling data ( = 30 samples) could accurately predict daily mean concentrations during these events. We found that using the gamma distribution underestimated high Cryptosporidium and Giardia concentrations measured with routine or event‐based monitoring. However, the log‐normal distribution accurately predicted these high concentrations. The selection of a log‐normal distribution in preference to a gamma distribution increased the annual mean concentration by less than 0.1‐log but increased the upper bound of the 95% credibility interval on the annual mean by about 0.5‐log. Therefore, considering parametric uncertainty in an exposure assessment is essential to account for microbial peaks in risk assessment.
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ABSTRACT Urbanization is leading to more frequent flooding as cities have more impervious surfaces and runoff exceeds the capacity of combined sewer systems. In heavy rainfall, contaminated excess water is discharged into the natural environment, damaging ecosystems and threatening drinking water sources. To address these challenges aggravated by climate change, urban blue-green water management systems, such as bioretention cells, are increasingly being adopted. Bioretention cells use substrate and plants adapted to the climate to manage rainwater. They form shallow depressions, allowing infiltration, storage, and gradual evacuation of runoff. In 2018, the City of Trois-Rivières (Québec, Canada) installed 54 bioretention cells along a residential street, several of which were equipped with access points to monitor performance. Groundwater quality was monitored through the installation of piezometers to detect potential contamination. This large-scale project aimed to improve stormwater quality and reduce sewer flows. The studied bioretention cells reduced the flow and generally improved water quality entering the sewer system, as well as the quality of stormwater, with some exceptions. Higher outflow concentrations were observed for contaminants such as manganese and nitrate. The results of this initiative provide useful recommendations for similar projects for urban climate change adaptation.
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ABSTRACT Wastewater-based epidemiology has emerged as a promising tool to monitor pathogens in a population, particularly when clinical diagnostic capacities become overwhelmed. During the ongoing COVID-19 pandemic caused by Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2), several jurisdictions have tracked viral concentrations in wastewater to inform public health authorities. While some studies have also sequenced SARS-CoV-2 genomes from wastewater, there have been relatively few direct comparisons between viral genetic diversity in wastewater and matched clinical samples from the same region and time period. Here we report sequencing and inference of SARS-CoV-2 mutations and variant lineages (including variants of concern) in 936 wastewater samples and thousands of matched clinical sequences collected between March 2020 and July 2021 in the cities of Montreal, Quebec City, and Laval, representing almost half the population of the Canadian province of Quebec. We benchmarked our sequencing and variant-calling methods on known viral genome sequences to establish thresholds for inferring variants in wastewater with confidence. We found that variant frequency estimates in wastewater and clinical samples are correlated over time in each city, with similar dates of first detection. Across all variant lineages, wastewater detection is more concordant with targeted outbreak sequencing than with semi-random clinical swab sampling. Most variants were first observed in clinical and outbreak data due to higher sequencing rate. However, wastewater sequencing is highly efficient, detecting more variants for a given sampling effort. This shows the potential for wastewater sequencing to provide useful public health data, especially at places or times when sufficient clinical sampling is infrequent or infeasible.